Stem-loop hsa-mir-3171

Accession

MI0014202

Symbol

HGNC: MIR3171

Description

Homo sapiens hsa-mir-3171 precursor miRNA

Literature search

1 open access papers mention hsa-mir-3171
(1 sentences)

Sequence

176 reads, 12.0 reads per million, 28 experiments

uauauauagAGAUGUAUGGAAUCUGUAUAUAUCuauauauauguguaUAUAUAGAUUCCAUAAAUCUAUauaug
((((((((((....((((((((((((((((((.(((....))).))))))))))))))))))..))))))))))

Structure

          GAUG                  C   a 
uauauauagA    UAUGGAAUCUGUAUAUAU uau u
||||||||||    |||||||||||||||||| |||  
guauaUAUCU    AUACCUUAGAUAUAUaug gua a
          --AA                  u   u 

Annotation confidence High

Genome context

chr14: 27633205-27633278 [-]

Disease association

hsa-mir-3171 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-3171-5p

• Accession: MIMAT0015046
• Description: Homo sapiens hsa-miR-3171-5p mature miRNA
• Sequence: 10 - AGAUGUAUGGAAUCUGUAUAUAUC - 33
• Evidence: experimental ; Illumina [1-2], Northern [3]

Mature hsa-miR-3171-3p

• Accession: MIMAT0050571
• Description: Homo sapiens hsa-miR-3171-3p mature miRNA
• Sequence: 48 - UAUAUAGAUUCCAUAAAUCUAU - 69
• Evidence: experimental ; Illumina [1-2], Northern [3]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637


3. PubMed ID: 20532037
   Re-inspection of small RNA sequence datasets reveals several novel human miRNA genes
   Hansen TB, Bramsen JB, Kjems J
   PLoS One (2010) 5:e10961