Stem-loop hsa-mir-3179-1

Accession

MI0014213

Symbol

HGNC: MIR3179-1

Description

Homo sapiens hsa-mir-3179-1 precursor miRNA

Literature search

3 open access papers mention hsa-mir-3179-1
(6 sentences)

Sequence

584 reads, 25 reads per million, 52 experiments

caggaucacagacguuuaaauuacacuccuucugcugugccuuacagcaguAGAAGGGGUGAAAUUUAAACGUcugugauccug
((((((((((((((((((((((.(((((((((((((((........))))))))))))))).))))))))))))))))))))))

Structure

                      a               gcc 
caggaucacagacguuuaaauu cacuccuucugcugu   u
|||||||||||||||||||||| |||||||||||||||    
guccuagugucUGCAAAUUUAA GUGGGGAAGAugacg   u
                      A               aca 

Annotation confidence Not enough data

Genome context

chr16: 14901508-14901591 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from hsa-mir-3179-1

Mature hsa-miR-3179

• Accession: MIMAT0015056
• Description: Homo sapiens hsa-miR-3179 mature miRNA
• Sequence: 52 - AGAAGGGGUGAAAUUUAAACGU - 73
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637


3. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86