Stem-loop hsa-mir-3130-1

Accession

MI0014147

Symbol

HGNC: MIR3130-1

Description

Homo sapiens hsa-mir-3130-1 precursor miRNA mir-3130

Gene
family

RF03736; mir-3130

Literature search

2 open access papers mention hsa-mir-3130-1
(5 sentences)

Sequence

841 reads, 14 reads per million, 77 experiments

cuugucaugucuUACCCAGUCUCCGGUGCAGCCuguugucaagGCUGCACCGGAGACUGGGUAAgacaugacaag
((((((((((((((((((((((((((((((((((.......))))))))))))))))))))))))))))))))))

Structure

                                  gu 
cuugucaugucuUACCCAGUCUCCGGUGCAGCCu  u
||||||||||||||||||||||||||||||||||  g
gaacaguacagAAUGGGUCAGAGGCCACGUCGga  u
                                  ac 

Annotation confidence High

Genome context

chr2: 206783234-206783308 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3130-1

Disease association

hsa-mir-3130-1 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-3130-3p

• Accession: MIMAT0014994
• Description: Homo sapiens hsa-miR-3130-3p mature miRNA
• Sequence: 44 - GCUGCACCGGAGACUGGGUAA - 64
• Evidence: experimental ; Illumina [1-3]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637


3. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86