Stem-loop hsa-mir-3116-2

Accession

MI0014129

Symbol

HGNC: MIR3116-2

Description

Homo sapiens hsa-mir-3116-2 precursor miRNA mir-3116

Gene
family

RF03754; mir-3116

Literature search

1 open access papers mention hsa-mir-3116-2
(1 sentences)

Sequence

147 reads, 2.0 reads per million, 60 experiments

uauugagUCCCUACUAUGUUCCAGGCACcuacgauacccagUGCCUGGAACAUAGUAGGGACUcaaua
((((((((((((((((((((((((((((............))))))))))))))))))))))))))))

Structure

                            cuacg 
uauugagUCCCUACUAUGUUCCAGGCAC     a
||||||||||||||||||||||||||||      
auaacUCAGGGAUGAUACAAGGUCCGUg     u
                            accca 

Annotation confidence High

Genome context

chr1: 62078789-62078856 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3116-2

Disease association

hsa-mir-3116-2 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-3116-2-5p

• Accession: MIMAT0050552
• Description: Homo sapiens hsa-miR-3116-2-5p mature miRNA
• Sequence: 8 - UCCCUACUAUGUUCCAGGCAC - 28
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-3116-3p

• Accession: MIMAT0014978
• Description: Homo sapiens hsa-miR-3116-3p mature miRNA
• Sequence: 42 - UGCCUGGAACAUAGUAGGGACU - 63
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637