Stem-loop hsa-mir-3175

Accession

MI0014209

Symbol

HGNC: MIR3175

Description

Homo sapiens hsa-mir-3175 precursor miRNA

Literature search

7 open access papers mention hsa-mir-3175
(11 sentences)

Sequence

409 reads, 3.0 reads per million, 79 experiments

ccuggggggCGGGGAGAGAACGCAGUGACGUcuggccgcgugcgcAUGUCGGGCGCUUUCUCCUCCCccuacccagg
(((((((((.(((((((((.(((..((((((.((........)).)))))).))).))))))))).)))..))))))

Structure

      --   C         A   AG      c  gcc 
ccuggg  ggg GGGGAGAGA CGC  UGACGU ug   g
||||||  ||| ||||||||| |||  |||||| ||    
ggaccc  ccC CUCCUCUUU GCG  GCUGUA gc   c
      au   C         C   -G      c  gug 

Annotation confidence High

Genome context

chr15: 92904399-92904475 [+]

Disease association

hsa-mir-3175 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-3175-5p

• Accession: MIMAT0015052
• Description: Homo sapiens hsa-miR-3175-5p mature miRNA
• Sequence: 10 - CGGGGAGAGAACGCAGUGACGU - 31
• Evidence: experimental ; Illumina [1-3]

Mature hsa-miR-3175-3p

• Accession: MIMAT0050573
• Description: Homo sapiens hsa-miR-3175-3p mature miRNA
• Sequence: 46 - AUGUCGGGCGCUUUCUCCUCCC - 67
• Evidence: experimental ; Illumina [1-3]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637


3. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86