Stem-loop hsa-mir-3126

Accession

MI0014143

Symbol

HGNC: MIR3126

Description

Homo sapiens hsa-mir-3126 precursor miRNA mir-3126

Gene
family

RF03180; mir-3126

Literature search

1 open access papers mention hsa-mir-3126
(2 sentences)

Sequence

282 reads, 18 reads per million, 41 experiments

augauuauaUGAGGGACAGAUGCCAGAAGCAcugguuaugauuugCAUCUGGCAUCCGUCACACAGAuaauuau
((((((((.((...(((.(((((((((.(((............))).))))))))).)))...)).))))))))

Structure

        a  AGG   A         A   cuggu 
augauuau UG   GAC GAUGCCAGA GCA     u
|||||||| ||   ||| ||||||||| |||      
uauuaauA AC   CUG CUACGGUCU Cgu     a
        G  ACA   C         A   uuagu 

Annotation confidence High

Genome context

chr2: 69103682-69103755 [+]

Mature hsa-miR-3126-5p

• Accession: MIMAT0014989
• Description: Homo sapiens hsa-miR-3126-5p mature miRNA
• Sequence: 10 - UGAGGGACAGAUGCCAGAAGCA - 31
• Evidence: experimental ; Illumina [2-4]

Mature hsa-miR-3126-3p

• Accession: MIMAT0015377
• Description: Homo sapiens hsa-miR-3126-3p mature miRNA
• Sequence: 46 - CAUCUGGCAUCCGUCACACAGA - 67
• Evidence: experimental ; SOLiD [1], Illumina [4]

References

1. PubMed ID: 19784364
   Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors
   Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP
   PLoS One (2009) 4:e7192


2. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


3. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637


4. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86