Stem-loop hsa-mir-548s

Accession

MI0014141

Symbol

HGNC: MIR548S

Description

Homo sapiens hsa-mir-548s precursor miRNA

Literature search

43 open access papers mention hsa-mir-548s
(146 sentences)

Sequence

533 reads, 5.0 reads per million, 90 experiments

uugcugcaaaaAUAAUUGCAGUUUUUGCCAUUauuuuuaauaauuauaauaAUGGCCAAAACUGCAGUUAUUUUugcaccaa
.((.(((((((((((((((((((((.(((((((((............))))))))).))))))))))))))))))))).)).

Structure

u  c                     U         uuuaa 
 ug ugcaaaaAUAAUUGCAGUUUU GCCAUUauu     u
 || ||||||||||||||||||||| |||||||||      
 ac acguUUUUAUUGACGUCAAAA CGGUAauaa     a
a  c                     C         uauua 

Annotation confidence Medium

Genome context

chr2: 11767444-11767525 [+]

Disease association

hsa-mir-548s is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-548s-5p

• Accession: MIMAT0050553
• Description: Homo sapiens hsa-miR-548s-5p mature miRNA
• Sequence: 12 - AUAAUUGCAGUUUUUGCCAUU - 32
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-548s-3p

• Accession: MIMAT0014987
• Description: Homo sapiens hsa-miR-548s-3p mature miRNA
• Sequence: 52 - AUGGCCAAAACUGCAGUUAUUUU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685