Stem-loop hsa-mir-3151

Accession

MI0014178

Symbol

HGNC: MIR3151

Description

Homo sapiens hsa-mir-3151 precursor miRNA mir-3151

Gene
family

RF03349; mir-3151

Literature search

6 open access papers mention hsa-mir-3151
(22 sentences)

Sequence

141 reads, 13 reads per million, 18 experiments

ggggugaugGGUGGGGCAAUGGGAUCAGGUgccucaaagggcaucccaCCUGAUCCCACAGCCCACCUgucacccc
(((((((((((((((.(..(((((((((((((((....)))).....)))))))))))..))))))))))))))))

Structure

               G AA           -----    c 
ggggugaugGGUGGG C  UGGGAUCAGGU     gccu a
||||||||||||||| |  |||||||||||     ||||  
ccccacugUCCACCC G  ACCCUAGUCCa     cggg a
               - AC           cccua    a 

Annotation confidence Not enough data

Genome context

chr8: 103154614-103154689 [+]

Mature hsa-miR-3151-5p

• Accession: MIMAT0015024
• Description: Homo sapiens hsa-miR-3151-5p mature miRNA
• Sequence: 10 - GGUGGGGCAAUGGGAUCAGGU - 30
• Evidence: experimental ; Illumina [1-4]

Mature hsa-miR-3151-3p

• Accession: MIMAT0027026
• Description: Homo sapiens hsa-miR-3151-3p mature miRNA
• Sequence: 49 - CCUGAUCCCACAGCCCACCU - 68
• Evidence: experimental ; Illumina [4]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 21606961
   Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
   "Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML"
   "Leukemia (2011) 25:1389-1399


3. PubMed ID: 22454130
   Transcription factors are targeted by differentially expressed miRNAs in primates
   "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
   "Genome Biol Evol (2012) 4:552-564


4. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45