Stem-loop hsa-mir-548x

Accession

MI0014244

Symbol

HGNC: MIR548X

Description

Homo sapiens hsa-mir-548x precursor miRNA

Literature search

43 open access papers mention hsa-mir-548x
(144 sentences)

Sequence

1073 reads, 11 reads per million, 43 experiments

agguuagUGCAAAAGUAAUUGCAGUUUUUGcguuacuuucaaucgUAAAAACUGCAAUUACUUUCacaccaaucu
(((((.(((..(((((((((((((((((((((...........)))))))))))))))))))))..))).)))))

Structure

     a   CA                     uuac 
agguu gUG  AAAGUAAUUGCAGUUUUUGcg    u
||||| |||  |||||||||||||||||||||    u
ucuaa cac  UUUCAUUAACGUCAAAAAUgc    u
     c   aC                     uaac 

Annotation confidence High

Genome context

chr21: 18686090-18686164 [-]

Disease association

hsa-mir-548x is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-548x-3p

• Accession: MIMAT0015081
• Description: Homo sapiens hsa-miR-548x-3p mature miRNA
• Sequence: 46 - UAAAAACUGCAAUUACUUUC - 65
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-548x-5p

• Accession: MIMAT0022733
• Description: Homo sapiens hsa-miR-548x-5p mature miRNA
• Sequence: 8 - UGCAAAAGUAAUUGCAGUUUUUG - 30
• Evidence: not_experimental

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685