Stem-loop hsa-mir-3187

Accession

MI0014231

Symbol

HGNC: MIR3187

Description

Homo sapiens hsa-mir-3187 precursor miRNA

Literature search

2 open access papers mention hsa-mir-3187
(3 sentences)

Sequence

570 reads, 26 reads per million, 51 experiments

gcuggcCCUGGGCAGCGUGUGGCUGAAGGucaccauguucuccUUGGCCAUGGGGCUGCGCGGggccagc
((((((((((.(((((.(((((((.((((............)))))))))))..))))).))))))))))

Structure

          G     -G       G    ucacc 
gcuggcCCUG GCAGC  UGUGGCU AAGG     a
|||||||||| |||||  ||||||| ||||      
cgaccggGGC CGUCG  GUACCGG UUcc     u
          G     GG       -    ucuug 

Annotation confidence High

Genome context

chr19: 813584-813653 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3187

Mature hsa-miR-3187-3p

• Accession: MIMAT0015069
• Description: Homo sapiens hsa-miR-3187-3p mature miRNA
• Sequence: 44 - UUGGCCAUGGGGCUGCGCGG - 63
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-3187-5p

• Accession: MIMAT0019216
• Description: Homo sapiens hsa-miR-3187-5p mature miRNA
• Sequence: 7 - CCUGGGCAGCGUGUGGCUGAAGG - 29
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86