Stem-loop hsa-mir-548w

Accession

MI0014222

Symbol

HGNC: MIR548W

Description

Homo sapiens hsa-mir-548w precursor miRNA

Literature search

41 open access papers mention hsa-mir-548w
(143 sentences)

Sequence

2932 reads, 19.0 reads per million, 114 experiments

gguuggugcAAAAGUAACUGCGGUUUUUGCCUuucaacauaauggcaaaacCCACAAUUACUUUUGCACCAAuc
(((((((((((((((((.((.((.(((((((............))))))).)).)).)))))))))))))))))

Structure

                 C  C  U       Uuuca 
gguuggugcAAAAGUAA UG GG UUUUGCC     a
||||||||||||||||| || || |||||||      
cuAACCACGUUUUCAUU AC CC aaaacgg     c
                 A  A  c       uaaua 

Annotation confidence Low

Genome context

chr16: 26025237-26025310 [+]

Mature hsa-miR-548w-5p

• Accession: MIMAT0015060
• Description: Homo sapiens hsa-miR-548w-5p mature miRNA
• Sequence: 10 - AAAAGUAACUGCGGUUUUUGCCU - 32
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-548w-3p

• Accession: MIMAT0050576
• Description: Homo sapiens hsa-miR-548w-3p mature miRNA
• Sequence: 52 - CCACAAUUACUUUUGCACCAA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685