Stem-loop hsa-mir-548u

Accession

MI0014168

Symbol

HGNC: MIR548U

Description

Homo sapiens hsa-mir-548u precursor miRNA

Literature search

42 open access papers mention hsa-mir-548u
(142 sentences)

Sequence

838 reads, 33 reads per million, 50 experiments

auuaggauggugcaaaaguaaugugguuuuuuucuuuacuuuuaauggCAAAGACUGCAAUUACUUUUGCGccaaccuaau
((((((.((((((((((((((((((((((((.((.(((....))).)).))))))))).))))))))))))))).))))))

Structure

      a               -         u  u   c 
auuagg uggugcaaaaguaau gugguuuuu uc uua u
|||||| ||||||||||||||| ||||||||| || |||  
uaaucc accGCGUUUUCAUUA CGUCAGAAA gg aau u
      a               A         C  u   u 

Annotation confidence Not enough data

Genome context

chr6: 57390132-57390212 [+]

Mature hsa-miR-548u

• Accession: MIMAT0015013
• Description: Homo sapiens hsa-miR-548u mature miRNA
• Sequence: 49 - CAAAGACUGCAAUUACUUUUGCG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685