miRBase entry: hsa-mir-548w

Stem-loop hsa-mir-548w


Accession
MI0014222
Symbol
HGNC: MIR548W
Description
Homo sapiens hsa-mir-548w precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
41 open access papers mention hsa-mir-548w
(141 sentences)

Sequence

1710 reads, 94 reads per million, 84 experiments
gguuggugcAAAAGUAACUGCGGUUUUUGCCUuucaacauaauggcaaaacccacaauuacuuuugcaccaauc
(((((((((((((((((.((.((.(((((((............))))))).)).)).)))))))))))))))))

Structure
                 C  C  U       Uuuca 
gguuggugcAAAAGUAA UG GG UUUUGCC     a
||||||||||||||||| || || |||||||      
cuaaccacguuuucauu ac cc aaaacgg     c
                 a  a  c       uaaua 


Annotation confidence Not enough data
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Genome context
chr16: 26025237-26025310 [+]

Database links

Mature hsa-miR-548w

Accession MIMAT0015060
Description Homo sapiens hsa-miR-548w mature miRNA
Sequence 10 - AAAAGUAACUGCGGUUUUUGCCU - 32
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685