miRBase entry: bmo-mir-2733j

Stem-loop bmo-mir-2733j


Accession
MI0014412
Description
Bombyx mori bmo-mir-2733j precursor miRNA
Gene family
MIPF0000766; mir-2733

Literature search
1 open access papers mention bmo-mir-2733j
(4 sentences)

Sequence

10 reads, 1 reads per million, 2 experiments
cuucuauaucucucucuaaugcAGUCAUCAUACUCUCAGUUGAUAuguguaacauucuaucacugggugcaugaugaucgugguagagagaucaucacaucacgc
..........((((((((.(((.((((((((.(.((((((.((((.(((...)))..)))))))))).).)))))))).))).))))))))..............

Structure
----cuucuauauc        a   A        A U      U    -u   u 
              ucucucua ugc GUCAUCAU C CUCAGU GAUA  gug  
              |||||||| ||| |||||||| | |||||| ||||  ||| a
              agagagau gug uaguagua g ggguca cuau  uac  
cgcacuacacuacu        g   c        c u      -    cu   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bmo-miR-2733j

Accession MIMAT0015539
Description Bombyx mori bmo-miR-2733j mature miRNA
Sequence 23 - AGUCAUCAUACUCUCAGUUGAUA - 45
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415