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miRBase |
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Stem-loop sequence bta-mir-3431 |
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Accession | MI0014498 (change log) | |||||||
Description | Bos taurus miR-3431 stem-loop | |||||||
Gene family | MIPF0002046; mir-3431 | |||||||
Literature search |
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5 open access papers mention bta-mir-3431 | |||||||
Stem-loop |
auacccaa u c cc - g -au c 5' ugaa g gaaaa ucagucag ccuu uggaugu guu u |||| | ||||| |||||||| |||| ||||||| ||| g 3' acuu c cuuuu agucaguc ggag aucuaca cag c ---aaucg u a aa a - guc a |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
Jin et al. predicted this miRNA bioinformatically in [1], and validated its expression by qPCR in [2]. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence bta-miR-3431 |
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Accession | MIMAT0017394 |
Sequence |
21 - ccucagucagccuuguggaugu - 42 |
Deep sequencing | 5336 reads, 67 experiments |
Evidence | experimental; qPCR [2], Illumina [3] |
Predicted targets |
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References |
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1 |
PMID:19758457
"Characterization of bovine miRNAs by sequencing and bioinformatics analysis"
BMC Mol Biol. 10:90(2009).
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2 | |
3 |
PMID:21912509
"Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle"
Int J Biol Sci. 7:1016-1026(2011).
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