Stem-loop bta-mir-3432a-1

Accession

MI0014500

Description

Bos taurus bta-mir-3432a-1 precursor miRNA

Gene family

MIPF0001187; mir-3432

Literature search

3 open access papers mention bta-mir-3432a-1
(4 sentences)

Sequence

3799 reads, 95 reads per million, 66 experiments

cuucgaucuuugucauggugUGCGGGAUCUUUAGUUGUGGUGugcaaacucucaguugcagcuugugggauccaguuccaugaccaaggauuggacc
.(((((((((((((((((...((.(((((((.((((((((.((....)).)).....))))))...))))))).)).)))))).)))))))))))..

Structure

-c           -      ugU  G       --U      -----  U  g 
  uucgaucuuug ucaugg   GC GGAUCUU   AGUUGU     GG Gu c
  ||||||||||| ||||||   || |||||||   ||||||     || ||  
  agguuaggaac aguacc   ug ccuaggg   ucgacg     uc ca a
cc           c      --u  a       ugu      uugac  u  a 

Annotation confidence Not enough data

Comments

Jin et al. predicted this miRNA bioinformatically in [1], and validated its expression by qPCR in [2].

Genome context

chr21: 55992009-55992105 [-]

Mature bta-miR-3432a

• Accession: MIMAT0017396
• Description: Bos taurus bta-miR-3432a mature miRNA
• Sequence: 21 - UGCGGGAUCUUUAGUUGUGGUG - 42
• Evidence: experimental ; qPCR [2], Illumina [3]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 20423511
   Characterization of microRNA expression in bovine adipose tissues: a potential regulatory mechanism of subcutaneous adipose tissue development
   Jin W, Dodson MV, Moore SS, Basarab JA, Guan LL
   BMC Mol Biol (2010) 11:29