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miRBase |
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Stem-loop sequence aly-MIR3441 |
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Accession | MI0014657 (change log) | ||||
Description | Arabidopsis lyrata miR3441 stem-loop | ||||
Stem-loop |
u a u a g c a u c auuauugacuucacucauaggaguggaacuaggau 5' guaguuu ugaucuucagcgaagaa augaagucguuuugcuucaaagcauc uuga ggaag gaaaguuaccaa u acguuuaguagc acu aagc a ||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||||| | |||||||||||| ||| |||| 3' caucaaa acuagaagucguuucuu uacuucagcaaaacgaaguuuuguag aacu ccuuc cuuucaaugguu a ugcaaaucaucg ugg uuug u u c u c a a c - u auuaacgaaagaaguguuugaguaucuuucguaag |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence aly-miR3441-5p.2 |
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Accession | MIMAT0017713 |
Previous IDs | aly-miR3441.2* |
Sequence |
19 - cgaagaaaaugaagucguuuu - 39 |
Deep sequencing | 7 reads, 1 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence aly-miR3441-5p.1 |
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Accession | MIMAT0017714 |
Previous IDs | aly-miR3441.1 |
Sequence |
42 - uucaaagcaucuuugaaggaa - 62 |
Deep sequencing | 20 reads, 1 experiments |
Evidence | experimental; Illumina [1] |
Database links |
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Mature sequence aly-miR3441-3p.1 |
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Accession | MIMAT0017715 |
Previous IDs | aly-miR3441.1* |
Sequence |
212 - cccucaaugauguuuugaagc - 232 |
Deep sequencing | 13 reads, 1 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence aly-miR3441-3p.2 |
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Accession | MIMAT0017716 |
Previous IDs | aly-miR3441.2 |
Sequence |
235 - aacgacuucaucuucuuugcu - 255 |
Deep sequencing | 3 reads, 1 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:20407027
"MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana"
Plant Cell. 22:1074-1089(2010).
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