Stem-loop sequence ssc-mir-744

AccessionMI0014769 (change log)
DescriptionSus scrofa miR-744 stem-loop
Gene family MIPF0000431; mir-744
Literature search

3 open access papers mention ssc-mir-744
(8 sentences)

Stem-loop 
   ----------------   gg     -  --g      cu   -ag   u 
5'                 gca  gugcg gg   cuaggg  aac   cag c
                   |||  ||||| ||   ||||||  |||   ||| u
3'                 cgu  cacgc cc   gguccu  uug   guc u
   cuccaaucaccguugu   -a     a  aaa      --   gaa   a
Get sequence
Deep sequencing
461 reads, 0 reads per million, 15 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Sscrofa10.2; GCA_000003025.4) Overlapping transcripts
chr12: 59358203-59358282 [+]
sense
ENSSSCT00000019611 ; MAP2K4-201; intron 3
Database links

Mature sequence ssc-miR-744

Accession MIMAT0015708
Sequence

7 -  

ugcggggcuagggcuaacagca

 - 28

Get sequence
Deep sequencing461 reads, 15 experiments
Evidence experimental; Illumina [1-2]

References

1
PMID:19917043 "MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing" Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B Anim Genet. 41:159-168(2010).
2
PMID:24499489 "Exploration of microRNAs in porcine milk exosomes" Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL BMC Genomics. 15:100(2014).