Accession
MI0015593
Description
Ciona intestinalis
cin-mir-4042 precursor miRNA
Gene family
MIPF0001266;
mir-4041
Sequence
317
reads,
1
reads per million, 2 experiments
UCAAUGAUUAAAGACCUAUUgccgaugaagcagcAGAUAGGACUUGAAUCACUG
.((.(((((.(((.((((((((.(......).))).))))).))).))))).))
.((.(((((.(((.((((((((.(......).))).))))).))).))))).))
Structure
U A A A - c au CA UGAUU AAG CCUAU Ugc g g || ||||| ||| ||||| ||| | GU ACUAA UUC GGAUA Acg c a - C G A G a ga
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
3p: 2002875-2002928 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from cin-mir-4042
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4042-5p
| Accession | MIMAT0016573 |
| Description | Ciona intestinalis cin-miR-4042-5p mature miRNA |
| Sequence | 1 - UCAAUGAUUAAAGACCUAUU - 20 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4042-3p
| Accession | MIMAT0016574 |
| Description | Ciona intestinalis cin-miR-4042-3p mature miRNA |
| Sequence | 35 - AGAUAGGACUUGAAUCACUG - 54 |
| Evidence |
experimental
Illumina [1] |
References
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