miRBase entry: cin-mir-4147

Stem-loop cin-mir-4147


Accession
MI0015702
Description
Ciona intestinalis cin-mir-4147 precursor miRNA


Sequence

agcaaccaaguagagauaauugagauuaaauaaaaAUCGUGUCUGCAAGUUUGCU
(((((.(..(((((.((.(((.............))).)).)))))..).)))))

Structure
     c aa     g  a   gagau 
agcaa c  guaga au auu     u
||||| |  ||||| || |||     a
UCGUU G  CGUCU UG UAa     a
     U AA     G  C   aaaua 


Annotation confidence Not enough data
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Genome context
scaffold_95: 383093-383147 [+]

Database links

Mature cin-miR-4147-3p

Accession MIMAT0016750
Description Ciona intestinalis cin-miR-4147-3p mature miRNA
Sequence 36 - AUCGUGUCUGCAAGUUUGCU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39