Stem-loop cin-mir-4151

Accession

MI0015706

Description

Ciona intestinalis cin-mir-4151 precursor miRNA

Sequence

11 reads, 5 reads per million, 2 experiments

GUGAUAAUAUGAUGUCAUAAuguucuacaUUGUGAUGUCAUAUUAUAUGUU
...((((((((((((((((((((...)))))))))))))))))))).....

Structure

--GUG                    u 
     AUAAUAUGAUGUCAUAAugu  
     |||||||||||||||||||| c
     UAUUAUACUGUAGUGUUaca  
UUGUA                    u 

Annotation confidence Not enough data

Genome context

scaffold_1693: 6716-6766 [-]

Mature cin-miR-4151-5p

• Accession: MIMAT0016754
• Description: Ciona intestinalis cin-miR-4151-5p mature miRNA
• Sequence: 1 - GUGAUAAUAUGAUGUCAUAA - 20
• Evidence: experimental ; Illumina [1]

Mature cin-miR-4151-3p

• Accession: MIMAT0016755
• Description: Ciona intestinalis cin-miR-4151-3p mature miRNA
• Sequence: 30 - UUGUGAUGUCAUAUUAUAUGUU - 51
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39