miRBase entry: cin-mir-4160

Stem-loop cin-mir-4160


Accession
MI0015715
Description
Ciona intestinalis cin-mir-4160 precursor miRNA


Sequence

uuaugauggaaugaucaacgaaugGAAGAUUGAAACAAACAUGG
.....(((......(((((........).))))......)))..

Structure
uuaug   gaauga    - gaa 
     aug      ucaa c   u
     |||      |||| |    
     UAC      AGUU G   g
---GG   AAACAA    A AAG 


Annotation confidence Not enough data
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Genome context
1q: 291994-292037 [-]

Database links

Mature cin-miR-4160-3p

Accession MIMAT0016766
Description Ciona intestinalis cin-miR-4160-3p mature miRNA
Sequence 25 - GAAGAUUGAAACAAACAUGG - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39