miRBase entry: cin-mir-4192

Stem-loop cin-mir-4192


Accession
MI0015749
Description
Ciona intestinalis cin-mir-4192 precursor miRNA


Sequence

uauaaaaaucuuuuuuuuaauauuuauugcaugUCAUGGAAAAUUGGUUAA
......((((..(((((((((((.......))))..)))))))..))))..

Structure
uauaaa    uu       --    uu 
      aauc  uuuuuua  auau  a
      ||||  |||||||  ||||  u
      UUGG  AAAAGGU  Ugua  u
----AA    UU       AC    cg 


Annotation confidence Not enough data
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Genome context
7q: 5090746-5090796 [+]

Database links

Mature cin-miR-4192-3p

Accession MIMAT0016810
Description Ciona intestinalis cin-miR-4192-3p mature miRNA
Sequence 34 - UCAUGGAAAAUUGGUUAA - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39