Stem-loop aly-MIR1887

Accession

MI0015781

Description

Arabidopsis lyrata aly-MIR1887 precursor miRNA

Gene family

MIPF0001125; MIR1887

Sequence

uuguuCACUUAGAUUGUUCUUAGUAUGAGuuguucucguacuaaguagagucuaagagaacaa
.(((((.((((((((.(.(((((((((((.....))))))))))).).)))))))).))))).

Structure

u     A        G U           u 
 uguuC CUUAGAUU U CUUAGUAUGAG u
 ||||| |||||||| | ||||||||||| g
 acaag gaaucuga a gaaucaugcuc u
a     a        g u           u 

Annotation confidence Not enough data

Genome context

GL348719.1: 9352612-9352674 [-]

Mature aly-miR1887

• Accession: MIMAT0017908
• Description: Arabidopsis lyrata aly-miR1887 mature miRNA
• Sequence: 6 - CACUUAGAUUGUUCUUAGUAUGAG - 29
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20407023
   Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus
   "Ma Z, Coruh C, Axtell MJ"
   "Plant Cell (2010) 22:1090-1103