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miRBase |
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Stem-loop sequence ssc-mir-381 |
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Accession | MI0015912 (change log) | |||||||
Description | Sus scrofa miR-381 stem-loop | |||||||
Gene family | MIPF0000018; mir-154 | |||||||
Literature search |
3 open access papers mention ssc-mir-381 | |||||||
Stem-loop |
-- a c g c u g g u 5' ugguacuua ag gag uug ccuu guauauuc g u u ||||||||| || ||| ||| |||| |||||||| | | u 3' acuaugagu uc cuc aac ggaa cauauaag u g g aa g u g a - g g a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence ssc-miR-381-5p |
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Accession | MIMAT0017957 |
Sequence |
11 - agcgagguugcccuuuguauauu - 33 |
Deep sequencing | 1 reads, 1 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence ssc-miR-381-3p |
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Accession | MIMAT0037380 |
Sequence |
51 - uauacaaggacaagcucucugu - 72 |
Deep sequencing | 482 reads, 15 experiments |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:20433717
"Deciphering the porcine intestinal microRNA transcriptome"
BMC Genomics. 11:275(2010).
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2 |
PMID:25230983
"The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing"
J Appl Genet. 56:239-252(2015).
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