miRBase entry: ssc-mir-376b

Stem-loop ssc-mir-376b


Accession
MI0015916
Description
Sus scrofa ssc-mir-376b precursor miRNA
Gene family
MIPF0000091; mir-368

Literature search
3 open access papers mention ssc-mir-376b
(3 sentences)

Sequence

uauuuaaaagGUGGCUAUUCCUUCUAUGUUUAuguuauuugugguuaaacauagaggaaauuccacguuuucaguauc
((((.((((.((((...(((((.(((((((((.............))))))))))))))...)))).)))).))))..

Structure
--    u    g    CUA     U         uguua 
  uauu aaaa GUGG   UUCCU CUAUGUUUA     u
  |||| |||| ||||   ||||| |||||||||     u
  auga uuuu cacc   aagga gauacaaau     u
cu    c    g    uua     -         uggug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssc-miR-376b

Accession MIMAT0017961
Description Sus scrofa ssc-miR-376b mature miRNA
Sequence 11 - GUGGCUAUUCCUUCUAUGUUUA - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20433717
    Deciphering the porcine intestinal microRNA transcriptome
    Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
    BMC Genomics (2010) 11:275