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miRBase |
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Stem-loop sequence ssc-mir-218-1 |
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Accession | MI0015924 (change log) | ||||
Previous IDs | ssc-mir-218 | ||||
Description | Sus scrofa miR-218-1 stem-loop | ||||
Gene family | MIPF0000026; mir-218 | ||||
Literature search |
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6 open access papers mention ssc-mir-218-1 | ||||
Stem-loop |
--a u u cu gg - g 5' gau uucugu gugcuugau aaccaugu uugc ca g ||| |||||| ||||||||| |||||||| |||| || 3' cug aaggua cacgaacug uugguaca aaug gu u gca c c uc -a a a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
Mature sequence ssc-miR-218-5p |
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Accession | MIMAT0022961 |
Sequence |
11 - uugugcuugaucuaaccaugu - 31 |
Deep sequencing | 581 reads, 12 experiments |
Evidence | experimental; Illumina [2] |
Mature sequence ssc-miR-218-3p |
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Accession | MIMAT0017969 |
Previous IDs | ssc-miR-218 |
Sequence |
54 - augguucugucaagcaccaug - 74 |
Evidence | experimental; Illumina [1-2] |
References |
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1 |
PMID:20433717
"Deciphering the porcine intestinal microRNA transcriptome"
BMC Genomics. 11:275(2010).
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2 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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