miRBase entry: ssc-mir-487b

Stem-loop ssc-mir-487b


Accession
MI0015928
Description
Sus scrofa ssc-mir-487b precursor miRNA
Gene family
MIPF0000018; mir-154

Literature search
4 open access papers mention ssc-mir-487b
(4 sentences)

Sequence

1 reads, 2 reads per million, 1 experiments
uacuuggagaGUGGUUAUCCCUGUCCUGUUCGuuuuacucaugucgaaucguacagggucauccacuuuuucaguauc
((((.(((((((((....((((((.(.(((((............))))).).))))))....))))))))).))))..

Structure
--    u         UUAU      C U     uuuua 
  uacu ggagaGUGG    CCCUGU C GUUCG     c
  |||| |||||||||    |||||| | |||||      
  auga uuuuucacc    gggaca g uaagc     u
cu    c         uacu      u c     uguac 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssc-miR-487b

Accession MIMAT0017973
Description Sus scrofa ssc-miR-487b mature miRNA
Sequence 11 - GUGGUUAUCCCUGUCCUGUUCG - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20433717
    Deciphering the porcine intestinal microRNA transcriptome
    Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
    BMC Genomics (2010) 11:275