miRBase entry: bta-mir-26c

Stem-loop bta-mir-26c


Accession
MI0015949
Description
Bos taurus bta-mir-26c precursor miRNA
Gene family
MIPF0000043; mir-26

Literature search
8 open access papers mention bta-mir-26c
(9 sentences)

Sequence

reads, None reads per million, experiments
caggcccgcguccgcgugcaaguaaccgagaauaggccccuugggaccugcacAGCCUAUCCUGGAUUACUUGAAcgaggccacggccuu
.(((((.(.(.((.(((.(((((((.(.((.((((((....((.......))..)))))).)).).))))))).))).)).).)))))).

Structure
c     c c u  g   g       c g  a      cccu  gg 
 aggcc g g cc cgu caaguaa c ag auaggc    ug  a
 ||||| | | || ||| ||||||| | || ||||||    ||  c
 uccgg c c gg gcA GUUCAUU G UC UAUCCG    ac  c
u     - a c  a   A       A G  C      --Ac  gu 


Annotation confidence Not enough data
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Genome context
chr22: 11513974-11514063 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-26c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-26c

Accession MIMAT0016938
Description Bos taurus bta-miR-26c mature miRNA
Sequence 54 - AGCCUAUCCUGGAUUACUUGAA - 75
Evidence experimental
cloned [1]

References

  1. PubMed ID: 19765282
    Identification and characterization of miRNAs expressed in the bovine ovary
    Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
    BMC Genomics (2009) 10:443