Stem-loop bta-mir-3604-2

Accession

MI0015951

Description

Bos taurus bta-mir-3604-2 precursor miRNA

Gene family

MIPF0001050; mir-3604

Literature search

1 open access papers mention bta-mir-3604-2
(1 sentences)

Sequence

322045 reads, 1 reads per million, 67 experiments

cagccUAACCAAUGUGCAGACUACUGUacaauuugggaguccugaacagauagucuaaacacuggguagacgg
....(((.(((.(((..((((((((((.((....((....)))).)))).))))))..))).))).)))....

Structure

cagc   A   A   GC      -    a  auuu  g 
    cUA CCA UGU  AGACUA CUGU ca    gg a
    ||| ||| |||  |||||| |||| ||    ||  
    gau ggu aca  ucugau gaca gu    cc g
ggca   g   c   aa      a    a  ----  u 

Annotation confidence Not enough data

Genome context

chr11: 99127781-99127853 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-mir-3604-2

Mature bta-miR-3604

• Accession: MIMAT0016939
• Description: Bos taurus bta-miR-3604 mature miRNA
• Sequence: 6 - UAACCAAUGUGCAGACUACUGU - 27
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443