miRBase entry: hsa-mir-3605

Stem-loop hsa-mir-3605


Accession
MI0015995
Symbol
HGNC: MIR3605
Description
Homo sapiens hsa-mir-3605 precursor miRNA
Gene family
MIPF0001639; mir-3605

Literature search
5 open access papers mention hsa-mir-3605
(13 sentences)

Sequence

1610 reads, 62 reads per million, 82 experiments
acuuuauacguguaauugugaUGAGGAUGGAUAGCAAGGAAGCCgcucccaccugacccucacggCCUCCGUGUUACCUGUCCUCUAGgugggacgcucg
.........((((.........((((((((.(((((.(((.((((.................)))).))).))))).))))))))........))))...

Structure
acuuuauac    aauugugaU        A     A   A    cucccac 
         gugu         GAGGAUGG UAGCA GGA GCCg       c
         ||||         |||||||| ||||| ||| ||||       u
         cgca         CUCCUGUC AUUGU CCU Cggc       g
------gcu    -gggugGAU        C     G   C    acuccca 


Annotation confidence High
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Genome context
chr1: 33332393-33332492 [-]

Database links

Mature hsa-miR-3605-5p

Accession MIMAT0017981
Description Homo sapiens hsa-miR-3605-5p mature miRNA
Sequence 22 - UGAGGAUGGAUAGCAAGGAAGCC - 44
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature hsa-miR-3605-3p

Accession MIMAT0017982
Description Homo sapiens hsa-miR-3605-3p mature miRNA
Sequence 66 - CCUCCGUGUUACCUGUCCUCUAG - 88
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20224791
    Discovery of novel microRNAs in female reproductive tract using next generation sequencing
    Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
    PLoS One (2010) 5:e9637

  2. PubMed ID: 20459774
    Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls
    Witten D, Tibshirani R, Gu SG, Fire A, Lui WO
    BMC Biol (2010) 8:58