Stem-loop tca-mir-iab-8

Accession

MI0016296

Description

Tribolium castaneum tca-mir-iab-8 precursor miRNA

Gene family

MIPF0000854; mir-iab-8

Sequence

ugaaauguggccuccugUUACGUAUACUGAAGGUAUACCGGACagaaaacacucAGGAUACAUUCAGUAUACGuacaggggguuuaacauucug
...(((((((((((((((.((((((((((((.((((.((.((..........)).)))))).))))))))))))))))))))))..)))))...

Structure

uga     --          U            G    A  G  Caga 
   aaugu  ggccuccugU ACGUAUACUGAA GUAU CC GA    a
   |||||  |||||||||| |||||||||||| |||| || ||     
   uuaca  uugggggaca uGCAUAUGACUU CAUA GG cu    a
guc     au          -            A    -  A  caca 

Annotation confidence Not enough data

Genome context

ChLG2: 7614302-7614395 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tca-mir-iab-8

Mature tca-miR-iab-8-5p

• Accession: MIMAT0018698
• Description: Tribolium castaneum tca-miR-iab-8-5p mature miRNA
• Sequence: 18 - UUACGUAUACUGAAGGUAUACCGGAC - 43
• Evidence: experimental ; SOLID [1]

Mature tca-miR-iab-8-3p

• Accession: MIMAT0018699
• Description: Tribolium castaneum tca-miR-iab-8-3p mature miRNA
• Sequence: 55 - AGGAUACAUUCAGUAUACG - 73
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696