Stem-loop tca-mir-750

Accession

MI0016358

Description

Tribolium castaneum tca-mir-750 precursor miRNA

Literature search

1 open access papers mention tca-mir-750
(1 sentences)

Sequence

agaaagcaaagggcccuuGGGUGGAAGGUUGGAUCUUCGCAUGauucaaguugCCAGAUCUAACUCUUCCAUAUGACGgucauuugccaaca
.....(((((.((((.(((.((((((((((((((((..(((..........))).))))))))).))))))).))).)))).))))).....

Structure

agaaa     g    c   G       -         UC   UGau 
     gcaaa ggcc uuG GUGGAAG GUUGGAUCU  GCA    u
     ||||| |||| ||| ||||||| |||||||||  |||     
     cguuu cugG AGU UACCUUC CAAUCUAGA  Cgu    c
acaac     a    C   A       U         -C   ugaa 

Annotation confidence Not enough data

Genome context

ChLG4: 9316826-9316917 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tca-mir-750

Mature tca-miR-750-5p

• Accession: MIMAT0018820
• Description: Tribolium castaneum tca-miR-750-5p mature miRNA
• Sequence: 19 - GGGUGGAAGGUUGGAUCUUCGCAUG - 43
• Evidence: experimental ; SOLID [1]

Mature tca-miR-750-3p

• Accession: MIMAT0018821
• Description: Tribolium castaneum tca-miR-750-3p mature miRNA
• Sequence: 54 - CCAGAUCUAACUCUUCCAUAUGACG - 78
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696