Stem-loop hsa-mir-3689b

Accession

MI0016411

Symbol

HGNC: MIR3689B

Description

Homo sapiens hsa-mir-3689b precursor miRNA

Gene family

MIPF0001144; mir-3689

Literature search

2 open access papers mention hsa-mir-3689b
(2 sentences)

Sequence

86 reads, 5 reads per million, 8 experiments

gauccugugcucccuggggggucugauccugugcuuccugggaggUGUGAUAUCAUGGUUCCUGGGAggugugaucccgugcuucCUGGGAGGUGUGAUAUUGUGGUuccugggaggugugaucccgugcucccugggaggugugauc
((((.....(((((.(((((((..((((...(((((((((((((.((((((((((((.(((((((((((((((....))))))))))))))).)))))))))))).))))))))))))).))))....))))))))))))....))))

Structure

    cugug     u       --cu    cug             g            G               a 
gauc     cuccc ggggggu    gauc   ugcuuccugggag UGUGAUAUCAUG UUCCUGGGAggugug u
||||     ||||| |||||||    ||||   ||||||||||||| |||||||||||| |||||||||||||||  
cuag     gaggg ucccucg    cuag   guggaggguccuU GUGUUAUAGUGU GAGGGUCcuucgugc c
    -ugug     -       ugcc    --u             G            G               c 

Annotation confidence Not enough data

Genome context

chr9: 134850125-134850272 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from hsa-mir-3689b

Mature hsa-miR-3689b-5p

• Accession: MIMAT0018180
• Description: Homo sapiens hsa-miR-3689b-5p mature miRNA
• Sequence: 46 - UGUGAUAUCAUGGUUCCUGGGA - 67
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-3689b-3p

• Accession: MIMAT0018181
• Description: Homo sapiens hsa-miR-3689b-3p mature miRNA
• Sequence: 86 - CUGGGAGGUGUGAUAUUGUGGU - 107
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637