Stem-loop gma-MIR1520g

Accession

MI0016486

Description

Glycine max gma-MIR1520g precursor miRNA

Gene family

MIPF0000581; MIR1520

Literature search

2 open access papers mention gma-MIR1520g
(2 sentences)

Sequence

augaugacugucacgugucauguucuaauugaaucuugaauccauggaagauaaaauacauuauuguuaucauugauCAAUCAGAACAUGACACGUGACAAucaucau
(((((((.((((((((((((((((((.(((((........((.((((..(((((......)))))....)))).))))))).)))))))))))))))))).)))))))

Structure

       c                  a     aucuugaa  c    --aa     aa 
augauga ugucacgugucauguucu auuga        uc augg    gauaa  u
||||||| |||||||||||||||||| |||||        || ||||    |||||   
uacuacu ACAGUGCACAGUACAAGA UAACu        ag uacu    uuauu  a
       A                  C     --------  u    auug     ac 

Annotation confidence Not enough data

Genome context

chr12: 32708631-32708738 [-]

Mature gma-miR1520g

• Accession: MIMAT0018245
• Description: Glycine max gma-miR1520g mature miRNA
• Sequence: 78 - CAAUCAGAACAUGACACGUGACAA - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14