miRBase entry: gma-MIR4387a

Stem-loop gma-MIR4387a


Accession
MI0016540
Description
Glycine max gma-MIR4387a precursor miRNA
Gene family
MIPF0001109; MIR4387

Literature search
2 open access papers mention gma-MIR4387a
(2 sentences)

Sequence

acgaagugucaugucaucacaccuugucacggacaccucauugucacgccaucaccuucgaugacauggcaaugacguguuaguAACAAGACGUGAUGACGUGACACUucgu
((((((((((((((((((((..(((((.((.(((((.(((((((((.(.((((......)))).).))))))))).))))).)).)))))..))))))))))))))))))))

Structure
                    ac     c  g     c         c c    ac 
acgaagugucaugucaucac  cuugu ac gacac ucauuguca g cauc  c
||||||||||||||||||||  ||||| || ||||| ||||||||| | ||||   
ugcuUCACAGUGCAGUAGUG  GAACA ug uugug aguaacggu c guag  u
                    CA     A  a     c         a a    cu 


Annotation confidence Not enough data
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Genome context
KQ474119.1: 490978-491089 [+]

Database links

Mature gma-miR4387a

Accession MIMAT0018299
Description Glycine max gma-miR4387a mature miRNA
Sequence 85 - AACAAGACGUGAUGACGUGACACU - 108
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14