miRBase entry: gma-MIR167g

Stem-loop gma-MIR167g


Accession
MI0016548
Description
Glycine max gma-MIR167g precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
26 open access papers mention gma-MIR167g
(200 sentences)

Sequence

cagcaguUGAAGCUGCCAGCAUGAUCUGAguuuaccuucuauugguaagaacagaucauguggcugcuucaccuguug
((((((.((((((.((((.(((((((((..((((((.......))))))..))))))))))))).)))))).))))))

Structure
      u      U    G         Ag      uu 
cagcag UGAAGC GCCA CAUGAUCUG  uuuacc  c
|||||| |||||| |||| |||||||||  ||||||  u
guuguc acuucg cggu guacuagac  gaaugg  a
      c      u    -         aa      uu 


Annotation confidence Not enough data
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Genome context
chr10: 39602156-39602233 [+]

Database links

Mature gma-miR167g

Accession MIMAT0018307
Description Glycine max gma-miR167g mature miRNA
Sequence 8 - UGAAGCUGCCAGCAUGAUCUGA - 29
Evidence experimental
Illumina [1], 454 [2]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14

  2. PubMed ID: 21504877
    MicroRNAs in the shoot apical meristem of soybean
    "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
    "J Exp Bot (2011) 62:2495-2506