miRBase entry: hsa-mir-548ae-2

Stem-loop hsa-mir-548ae-2


Accession
MI0016780
Symbol
HGNC: MIR548AE2
Description
Homo sapiens hsa-mir-548ae-2 precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
56 open access papers mention hsa-mir-548ae-2
(170 sentences)

Sequence

4538 reads, 150 reads per million, 109 experiments
ugugcAAAAGUAAUUGUGGUUUUUGucauuuaaaaguaauggCAAAAACUGCAAUUACUUUCAcacc
.(((..((((((((((((((((((((((((.......))))))))))))))))))))))))..))).

Structure
u   cA                        ua 
 gug  AAAGUAAUUGUGGUUUUUGucauu  a
 |||  ||||||||||||||||||||||||  a
 cac  UUUCAUUAACGUCAAAAACgguaa  a
c   AC                        ug 


Annotation confidence High
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Genome context
chr5: 58530043-58530109 [-]

Database links

Mature hsa-miR-548ae-3p

Accession MIMAT0018954
Description Homo sapiens hsa-miR-548ae-3p mature miRNA
Sequence 43 - CAAAAACUGCAAUUACUUUCA - 63
Evidence experimental
Illumina [1]

Mature hsa-miR-548ae-5p

Accession MIMAT0032115
Description Homo sapiens hsa-miR-548ae-5p mature miRNA
Sequence 6 - AAAAGUAAUUGUGGUUUUUG - 25
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 20733160
    Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
    "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
    "Blood (2010) 116:e118-e127