Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs |
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PubMed ID | 20733160 |
Authors | "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI," |
Journal | "Blood |
Volume | 116 |
Pages | e118-e127 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
---|---|---|---|---|---|---|---|
hsa-mir-550a-3 | MI0003762 | 198 | chr7 | 29680734 | 29680828 | - | High |
hsa-mir-151b | MI0003772 | 878 | chr14 | 100109419 | 100109514 | - | - |
hsa-mir-378d-2 | MI0003840 | 3410 | chr8 | 93916022 | 93916119 | - | - |
hsa-mir-548o-2 | MI0016746 | 116 | chr20 | 38516563 | 38516632 | + | High |
hsa-mir-1254-2 | MI0016747 | None | None | None | - | ||
hsa-mir-1268b | MI0016748 | 136 | chr17 | 80098828 | 80098877 | + | - |
hsa-mir-378d-1 | MI0016749 | 3385 | chr4 | 5923275 | 5923328 | - | - |
hsa-mir-378e | MI0016750 | 246 | chr5 | 170028488 | 170028566 | + | - |
hsa-mir-548h-5 | MI0016751 | 48 | chr6 | 131792172 | 131792231 | + | - |
hsa-mir-548ab | MI0016752 | 71 | chr3 | 103524033 | 103524116 | - | - |
hsa-mir-4417 | MI0016753 | None | None | None | - | ||
hsa-mir-4418 | MI0016754 | 0 | chr1 | 22266239 | 22266300 | + | - |
hsa-mir-4419a | MI0016755 | None | None | None | - | ||
hsa-mir-378f | MI0016756 | 31 | chr1 | 23929070 | 23929147 | + | - |
hsa-mir-4420 | MI0016757 | 17 | chr1 | 30739156 | 30739232 | - | - |
hsa-mir-4421 | MI0016758 | 22 | chr1 | 51059837 | 51059905 | + | - |
hsa-mir-4422 | MI0016759 | 14 | chr1 | 55225641 | 55225723 | + | - |
hsa-mir-4423 | MI0016760 | 246 | chr1 | 85133794 | 85133873 | + | High |
hsa-mir-378g | MI0016761 | 30 | None | None | - | ||
hsa-mir-548ac | MI0016762 | 34 | chr1 | 116560024 | 116560111 | - | - |
hsa-mir-4424 | MI0016763 | 9 | chr1 | 178677749 | 178677834 | + | - |
hsa-mir-4425 | MI0016764 | 48 | chr1 | 25023503 | 25023586 | + | - |
hsa-mir-4426 | MI0016765 | 25 | chr1 | 192716328 | 192716390 | + | - |
hsa-mir-4427 | MI0016766 | 10 | chr1 | 233624152 | 233624219 | + | - |
hsa-mir-4428 | MI0016767 | 5 | chr1 | 237471119 | 237471191 | + | - |
hsa-mir-4429 | MI0016768 | 25 | chr2 | 11540605 | 11540677 | - | - |
hsa-mir-4430 | MI0016769 | 35 | chr2 | 33418516 | 33418564 | + | - |
hsa-mir-548ad | MI0016770 | 151 | chr2 | 35471405 | 35471486 | + | - |
hsa-mir-4431 | MI0016771 | 23 | chr2 | 52702522 | 52702615 | - | - |
hsa-mir-4432 | MI0016772 | 0 | chr2 | 60387362 | 60387445 | - | - |
hsa-mir-4433a | MI0016773 | 7 | chr2 | 64340759 | 64340839 | + | - |
hsa-mir-4434 | MI0016774 | 3 | chr2 | 64525513 | 64525565 | + | - |
hsa-mir-4435-1 | MI0016775 | 12 | chr2 | 87629755 | 87629834 | + | - |
hsa-mir-4436a | MI0016776 | 7 | chr2 | 88812370 | 88812454 | + | - |
hsa-mir-4435-2 | MI0016777 | 12 | chr2 | 111321013 | 111321086 | - | - |
hsa-mir-4437 | MI0016778 | 9 | chr2 | 181305593 | 181305652 | - | - |
hsa-mir-548ae-1 | MI0016779 | 40 | chr2 | 184378975 | 184379044 | + | - |
hsa-mir-548ae-2 | MI0016780 | 150 | chr5 | 58530043 | 58530109 | - | High |
hsa-mir-4438 | MI0016781 | 1 | chr2 | 213758067 | 213758159 | + | - |
hsa-mir-4439 | MI0016782 | 1 | chr2 | 225010461 | 225010540 | - | - |
hsa-mir-4440 | MI0016783 | 7 | chr2 | 239068817 | 239068914 | - | - |
hsa-mir-4441 | MI0016784 | 0 | chr2 | 239085827 | 239085926 | - | - |
hsa-mir-4442 | MI0016785 | 39 | chr3 | 25664873 | 25664939 | - | - |
hsa-mir-4443 | MI0016786 | 1181 | chr3 | 48196564 | 48196616 | + | - |
hsa-mir-4444-1 | MI0016787 | 117 | chr2 | 177212726 | 177212799 | + | - |
hsa-mir-4445 | MI0016788 | 2 | chr3 | 109602828 | 109602897 | + | - |
hsa-mir-4446 | MI0016789 | 17 | chr3 | 113594876 | 113594942 | + | - |
hsa-mir-4447 | MI0016790 | 1 | chr3 | 116850277 | 116850367 | - | - |
hsa-mir-4448 | MI0016791 | 13 | chr3 | 183886800 | 183886885 | + | - |
hsa-mir-4449 | MI0016792 | 260 | chr4 | 52712682 | 52712747 | + | - |
hsa-mir-548ag-1 | MI0016793 | 8 | chr4 | 60922619 | 60922684 | + | - |
hsa-mir-548ag-2 | MI0016794 | 24 | chr20 | 60564562 | 60564625 | + | - |
hsa-mir-4450 | MI0016795 | 5 | chr4 | 76573568 | 76573632 | + | - |
hsa-mir-548ah | MI0016796 | 15 | chr4 | 76575551 | 76575626 | + | - |
hsa-mir-4451 | MI0016797 | 13 | chr4 | 85722468 | 85722533 | + | - |
hsa-mir-4452 | MI0016798 | 9 | chr4 | 86542482 | 86542552 | - | - |
hsa-mir-4453 | MI0016799 | 10 | chr4 | 152536428 | 152536516 | + | - |
hsa-mir-4454 | MI0016800 | 349 | chr4 | 163093574 | 163093628 | - | - |
hsa-mir-4455 | MI0016801 | 2 | chr4 | 184938383 | 184938440 | - | - |
hsa-mir-4456 | MI0016802 | 0 | None | None | - | ||
hsa-mir-4457 | MI0016803 | 10 | chr5 | 1309310 | 1309377 | - | - |
hsa-mir-4458 | MI0016804 | 13 | chr5 | 8460925 | 8460999 | + | - |
hsa-mir-4459 | MI0016805 | None | None | None | - | ||
hsa-mir-4460 | MI0016806 | 5 | chr5 | 129397062 | 129397147 | - | - |
hsa-mir-4461 | MI0016807 | None | None | None | - | ||
hsa-mir-378h | MI0016808 | 4 | chr5 | 154829458 | 154829540 | + | - |
hsa-mir-3135b | MI0016809 | 77 | chr6 | 32749912 | 32749979 | - | - |
hsa-mir-4462 | MI0016810 | 0 | chr6 | 37555365 | 37555422 | - | - |
hsa-mir-4463 | MI0016811 | 4 | chr6 | 75428407 | 75428473 | + | - |
hsa-mir-4464 | MI0016812 | 22 | chr6 | 90312742 | 90312833 | + | - |
hsa-mir-548ai | MI0016813 | 31 | chr6 | 99124609 | 99124696 | + | - |
hsa-mir-548aj-1 | MI0016814 | 26 | chr6 | 132115192 | 132115263 | - | - |
hsa-mir-548aj-2 | MI0016815 | 131 | chrX | 38023895 | 38023986 | - | - |
hsa-mir-4465 | MI0016816 | 0 | chr6 | 140683814 | 140683883 | + | - |
hsa-mir-4466 | MI0016817 | 15 | chr6 | 156779678 | 156779731 | - | - |
hsa-mir-4467 | MI0016818 | 25 | chr7 | 102471469 | 102471531 | + | - |
hsa-mir-4468 | MI0016819 | 8 | chr7 | 138123758 | 138123821 | + | - |
hsa-mir-4469 | MI0016820 | 7 | chr8 | 42896197 | 42896275 | - | - |
hsa-mir-4470 | MI0016821 | 57 | chr8 | 61714788 | 61714859 | + | - |
hsa-mir-4471 | MI0016822 | 2 | chr8 | 100382763 | 100382845 | + | - |
hsa-mir-4472-1 | MI0016823 | 0 | chr8 | 142176339 | 142176418 | + | - |
hsa-mir-4472-2 | MI0016824 | 319 | chr12 | 116428252 | 116428318 | - | - |
hsa-mir-4473 | MI0016825 | 58 | chr9 | 20411148 | 20411238 | - | - |
hsa-mir-4474 | MI0016826 | 9 | chr9 | 20502265 | 20502342 | - | - |
hsa-mir-4475 | MI0016827 | 4 | chr9 | 36823539 | 36823599 | - | - |
hsa-mir-4476 | MI0016828 | 23 | chr9 | 36893462 | 36893531 | - | - |
hsa-mir-4477a | MI0016829 | 14 | chr9 | 41233755 | 41233835 | + | - |
hsa-mir-4477b | MI0016830 | 17 | chr9 | 41233755 | 41233835 | - | - |
hsa-mir-4478 | MI0016831 | 8 | chr9 | 122120082 | 122120167 | - | - |
hsa-mir-3689c | MI0016832 | 3 | chr9 | 134849298 | 134849369 | - | - |
hsa-mir-548x-2 | MI0016833 | 27 | chr13 | 65966330 | 65966429 | - | - |
hsa-mir-3689d-1 | MI0016834 | 0 | chr9 | 134849609 | 134849682 | - | - |
hsa-mir-3689d-2 | MI0016835 | 0 | chr9 | 134850277 | 134850356 | - | - |
hsa-mir-3689e | MI0016836 | 5 | chr9 | 134850570 | 134850641 | - | - |
hsa-mir-3689f | MI0016837 | 3 | chr9 | 134850742 | 134850807 | - | - |
hsa-mir-4479 | MI0016838 | 29 | chr9 | 136886733 | 136886803 | + | - |
hsa-mir-3155b | MI0016839 | 10 | chr10 | 6152207 | 6152262 | - | - |
hsa-mir-548ak | MI0016840 | 52 | chr10 | 12130760 | 12130816 | - | - |
hsa-mir-4480 | MI0016841 | 0 | chr10 | 12578753 | 12578823 | + | - |
hsa-mir-4481 | MI0016842 | 0 | chr10 | 12653138 | 12653197 | - | - |
hsa-mir-4482 | MI0016843 | 34 | chr10 | 104268336 | 104268405 | - | - |
hsa-mir-4483 | MI0016844 | 0 | chr10 | 113777993 | 113778054 | - | - |
hsa-mir-4484 | MI0016845 | 182 | chr10 | 125819740 | 125819822 | + | - |
hsa-mir-4485 | MI0016846 | 314 | chr11 | 10508270 | 10508326 | - | Low |
hsa-mir-4486 | MI0016847 | 1 | chr11 | 19575310 | 19575372 | + | - |
hsa-mir-4487 | MI0016848 | 34 | chr11 | 47400970 | 47401042 | + | - |
hsa-mir-4488 | MI0016849 | 47 | chr11 | 61508596 | 61508657 | + | - |
hsa-mir-4489 | MI0016850 | 3 | chr11 | 65649192 | 65649253 | + | - |
hsa-mir-548al | MI0016851 | 45 | chr11 | 74399237 | 74399333 | + | - |
hsa-mir-4490 | MI0016852 | 0 | chr11 | 90555774 | 90555857 | - | - |
hsa-mir-4491 | MI0016853 | 10 | chr11 | 111347757 | 111347824 | + | - |
hsa-mir-4492 | MI0016854 | 31 | chr11 | 118910708 | 118910787 | + | - |
hsa-mir-4493 | MI0016855 | 3 | chr11 | 123381440 | 123381512 | - | - |
hsa-mir-4494 | MI0016856 | 0 | chr12 | 47364186 | 47364269 | - | - |
hsa-mir-4495 | MI0016857 | 0 | chr12 | 97939056 | 97939121 | - | - |
hsa-mir-4496 | MI0016858 | 2 | chr12 | 108635810 | 108635870 | + | - |
hsa-mir-4497 | MI0016859 | 106 | chr12 | 109833348 | 109833436 | + | - |
hsa-mir-4498 | MI0016860 | 16 | chr12 | 120155434 | 120155499 | - | - |
hsa-mir-4419b | MI0016861 | None | None | None | - | ||
hsa-mir-4499 | MI0016862 | 0 | chr13 | 20433778 | 20433846 | - | - |
hsa-mir-4500 | MI0016863 | 2 | chr13 | 87618665 | 87618740 | - | - |
hsa-mir-4501 | MI0016864 | 12 | chr13 | 96427229 | 96427292 | + | - |
hsa-mir-4502 | MI0016865 | 6 | chr13 | 114273828 | 114273908 | + | - |
hsa-mir-4503 | MI0016866 | 3 | chr14 | 36952309 | 36952391 | - | - |
hsa-mir-4504 | MI0016867 | 12 | chr14 | 50299855 | 50299946 | - | - |
hsa-mir-4505 | MI0016868 | 4 | chr14 | 73758747 | 73758819 | + | - |
hsa-mir-4506 | MI0016869 | 3 | chr14 | 93948226 | 93948302 | - | - |
hsa-mir-2392 | MI0016870 | 3 | chr14 | 100814491 | 100814574 | + | - |
hsa-mir-4507 | MI0016871 | 1 | chr14 | 105858124 | 105858175 | - | - |
hsa-mir-4508 | MI0016872 | 81 | chr15 | 23562062 | 23562131 | - | - |
hsa-mir-4509-1 | MI0016873 | 3 | chr15 | 23197827 | 23197920 | + | - |
hsa-mir-4509-2 | MI0016874 | 3 | chr15 | 28426491 | 28426584 | + | - |
hsa-mir-4509-3 | MI0016875 | 3 | chr15 | 28490752 | 28490845 | - | - |
hsa-mir-4510 | MI0016876 | 12 | chr15 | 35926856 | 35926923 | + | - |
hsa-mir-4511 | MI0016877 | 17 | chr15 | 65719246 | 65719332 | - | - |
hsa-mir-4512 | MI0016878 | 12 | chr15 | 66496958 | 66497034 | - | - |
hsa-mir-4513 | MI0016879 | 3 | chr15 | 74788672 | 74788757 | - | - |
hsa-mir-4514 | MI0016880 | 0 | chr15 | 80997417 | 80997473 | - | - |
hsa-mir-4515 | MI0016881 | 11 | chr15 | 83067335 | 83067415 | + | - |
hsa-mir-4516 | MI0016882 | 147 | chr16 | 2133119 | 2133204 | + | - |
hsa-mir-4517 | MI0016883 | 93 | chr16 | 28958583 | 28958661 | + | - |
hsa-mir-4518 | MI0016884 | 10 | chr16 | 30503919 | 30504001 | + | - |
hsa-mir-4519 | MI0016885 | 14 | chr16 | 30875266 | 30875323 | - | - |
hsa-mir-4520-1 | MI0016886 | 13 | chr17 | 6655440 | 6655509 | - | - |
hsa-mir-4521 | MI0016887 | 2192 | chr17 | 8186945 | 8187004 | + | - |
hsa-mir-1269b | MI0016888 | 94 | chr17 | 12917268 | 12917342 | - | - |
hsa-mir-4522 | MI0016889 | 11 | chr17 | 27293910 | 27293996 | - | - |
hsa-mir-4523 | MI0016890 | 10 | chr17 | 29390662 | 29390730 | + | - |
hsa-mir-4524a | MI0016891 | 17 | chr17 | 69099564 | 69099632 | - | High |
hsa-mir-4525 | MI0016892 | 62 | chr17 | 82668233 | 82668307 | - | - |
hsa-mir-4526 | MI0016893 | 6 | chr18 | 13611114 | 13611200 | + | - |
hsa-mir-4527 | MI0016894 | 1 | chr18 | 47380496 | 47380565 | + | - |
hsa-mir-4528 | MI0016895 | 0 | chr18 | 53237101 | 53237190 | + | - |
hsa-mir-4529 | MI0016896 | 7 | chr18 | 55479221 | 55479298 | + | - |
hsa-mir-4530 | MI0016897 | 39 | chr19 | 39409623 | 39409678 | - | - |
hsa-mir-4531 | MI0016898 | 1 | chr19 | 44653686 | 44653732 | - | - |
hsa-mir-4532 | MI0016899 | None | None | None | - | ||
hsa-mir-4533 | MI0016900 | 4 | chr20 | 60478111 | 60478181 | + | - |
hsa-mir-4534 | MI0016901 | 0 | chr22 | 37988794 | 37988853 | + | - |
hsa-mir-378i | MI0016902 | 24 | chr22 | 41923222 | 41923297 | - | - |
hsa-mir-4535 | MI0016903 | 0 | chr22 | 48780295 | 48780353 | + | - |
hsa-mir-548am | MI0016904 | 141 | chrX | 16627012 | 16627085 | - | High |
hsa-mir-1587 | MI0016905 | 1 | chrX | 39837561 | 39837613 | + | - |
hsa-mir-4536-1 | MI0016906 | 23 | chrX | 55451495 | 55451582 | - | - |
hsa-mir-548an | MI0016907 | 55 | chrX | 106639814 | 106639896 | + | - |
hsa-mir-4537 | MI0016908 | 2 | chr14 | 105859484 | 105859553 | - | - |
hsa-mir-4538 | MI0016909 | 1 | chr14 | 105858165 | 105858242 | - | - |
hsa-mir-4539 | MI0016910 | 1 | chr14 | 105857513 | 105857572 | - | - |
hsa-mir-4540 | MI0016911 | 0 | chr9 | 36864254 | 36864308 | - | - |
hsa-mir-4444-2 | MI0019111 | 117 | chr3 | 75214476 | 75214549 | + | - |