miRBase entry: hsa-mir-3689e

Stem-loop hsa-mir-3689e


Accession
MI0016836
Symbol
HGNC: MIR3689E
Description
Homo sapiens hsa-mir-3689e precursor miRNA


Sequence

81 reads, 5 reads per million, 6 experiments
gggaggUGUGAUAUCAUGGUUCCUGGGAgguaugauaucgugguuccugggaggugugaucccgugcucccu
(((((...((..((((((.((((((((((.((((....)))).)))))))))).))))))..))..))))).

Structure
-     gUG  AU      G          g    a 
 gggag   UG  AUCAUG UUCCUGGGAg uaug u
 |||||   ||  |||||| |||||||||| ||||  
 cccuc   gc  uagugu gaggguccuu gugc a
u     -gu  cc      g          g    u 


Annotation confidence Not enough data
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Genome context
chr9: 134850570-134850641 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from hsa-mir-3689e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-3689e

Accession MIMAT0019009
Description Homo sapiens hsa-miR-3689e mature miRNA
Sequence 7 - UGUGAUAUCAUGGUUCCUGGGA - 28
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20733160
    Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
    "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
    "Blood (2010) 116:e118-e127