Stem-loop hsa-mir-548o-2

Accession

MI0016746

Symbol

HGNC: MIR548O2

Description

Homo sapiens hsa-mir-548o-2 precursor miRNA

Literature search

41 open access papers mention hsa-mir-548o-2
(141 sentences)

Sequence

3531 reads, 25 reads per million, 88 experiments

uggugcAAAAGUAAUUGCGGUUUUUGCCauuaaaaguaaugcggCCAAAACUGCAGUUACUUUUGCaccc
.(((((((((((((((((((((((.(((((((....))))..))).))))))))))))))))))))))).

Structure

u                       U   --    a 
 ggugcAAAAGUAAUUGCGGUUUU GCC  auua a
 ||||||||||||||||||||||| |||  ||||  
 ccaCGUUUUCAUUGACGUCAAAA Cgg  uaau a
c                       C   cg    g 

Annotation confidence High

Genome context

chr20: 38516563-38516632 [+]

Mature hsa-miR-548o-3p

• Accession: MIMAT0005919
• Description: Homo sapiens hsa-miR-548o-3p mature miRNA
• Sequence: 45 - CCAAAACUGCAGUUACUUUUGC - 66
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-548o-5p

• Accession: MIMAT0022738
• Description: Homo sapiens hsa-miR-548o-5p mature miRNA
• Sequence: 7 - AAAAGUAAUUGCGGUUUUUGCC - 28
• Evidence: not_experimental

References

1. PubMed ID: 20733160
   Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
   "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
   "Blood (2010) 116:e118-e127