Stem-loop hsa-mir-548al

Accession

MI0016851

Symbol

HGNC: MIR548AL

Description

Homo sapiens hsa-mir-548al precursor miRNA

Literature search

56 open access papers mention hsa-mir-548al
(171 sentences)

Sequence

613 reads, 7.0 reads per million, 95 experiments

ggucgguGCAAAAGUAAUUGCUGUUUuugccauuaaaaauaauggcauuaaaaguaauggcaaaAACGGCAAUGACUUUUGUACCAaucuaauaucu
(((.(((((((((((.(((((((((((((((((((....((((...))))....))))))))))))))))))).))))))))))).)))........

Structure

--------   c           A                   aaaa    g 
        ggu gguGCAAAAGU AUUGCUGUUUuugccauua    uaau  
        ||| ||||||||||| |||||||||||||||||||    |||| g
        cua CCAUGUUUUCA UAACGGCAAaaacgguaau    auua  
ucuauaau   A           G                   gaaa    c 

Annotation confidence Medium

Genome context

chr11: 74399237-74399333 [+]

Mature hsa-miR-548al-5p

• Accession: MIMAT0050631
• Description: Homo sapiens hsa-miR-548al-5p mature miRNA
• Sequence: 8 - GCAAAAGUAAUUGCUGUUU - 26
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-548al-3p

• Accession: MIMAT0019024
• Description: Homo sapiens hsa-miR-548al-3p mature miRNA
• Sequence: 65 - AACGGCAAUGACUUUUGUACCA - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20733160
   Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
   "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
   "Blood (2010) 116:e118-e127