Stem-loop hsa-mir-548ah

Accession

MI0016796

Symbol

HGNC: MIR548AH

Description

Homo sapiens hsa-mir-548ah precursor miRNA

Literature search

56 open access papers mention hsa-mir-548ah
(171 sentences)

Sequence

2193 reads, 6.0 reads per million, 100 experiments

agguuggugcAAAAGUGAUUGCAGUGUUUGCCaauaaaaguaaugaCAAAAACUGCAGUUACUUUUGCaccagccc
.((((((((((((((((((((((((.((((.((.((....)).)).)))).)))))))))))))))))))))))).

Structure

a                        G    C  a  a 
 gguuggugcAAAAGUGAUUGCAGU UUUG Ca ua a
 |||||||||||||||||||||||| |||| || ||  
 ccgaccaCGUUUUCAUUGACGUCA AAAC gu au a
c                        A    a  a  g 

Annotation confidence High

Genome context

chr4: 76575551-76575626 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-548ah

Disease association

hsa-mir-548ah is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-548ah-5p

• Accession: MIMAT0018972
• Description: Homo sapiens hsa-miR-548ah-5p mature miRNA
• Sequence: 11 - AAAAGUGAUUGCAGUGUUUGCC - 32
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-548ah-3p

• Accession: MIMAT0020957
• Description: Homo sapiens hsa-miR-548ah-3p mature miRNA
• Sequence: 47 - CAAAAACUGCAGUUACUUUUGC - 68
• Evidence: not_experimental

References

1. PubMed ID: 20733160
   Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
   "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
   "Blood (2010) 116:e118-e127


2. PubMed ID: 21911355
   miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
   "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
   "Nucleic Acids Res (2012) 40:37-52


3. PubMed ID: 21558790
   Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis
   "Hansen TB, Kjems J, Bramsen JB"
   "RNA Biol (2011) 8:378-383