miRBase entry: hsa-mir-3689c

Stem-loop hsa-mir-3689c


Accession
MI0016832
Symbol
HGNC: MIR3689C
Description
Homo sapiens hsa-mir-3689c precursor miRNA
Gene family
MIPF0001144; mir-3689

Literature search
2 open access papers mention hsa-mir-3689c
(2 sentences)

Sequence

18 reads, 3 reads per million, 4 experiments
gggaggugugauaucgugguuccugggaggugugauaucgugguucCUGGGAGGUGUGAUAUUGUGGUuccu
(((((.((((((((((((.((((((((((.((((....)))).)))))))))).)))))))))))).)))))

Structure
     g            g          g    a 
gggag ugugauaucgug uuccugggag ugug u
||||| |||||||||||| |||||||||| ||||  
uccuU GUGUUAUAGUGU GAGGGUCcuu gugc a
     G            G          g    u 


Annotation confidence Not enough data
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Genome context
chr9: 134849298-134849369 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from hsa-mir-3689c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-3689c

Accession MIMAT0019007
Description Homo sapiens hsa-miR-3689c mature miRNA
Sequence 47 - CUGGGAGGUGUGAUAUUGUGGU - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20733160
    Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
    "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
    "Blood (2010) 116:e118-e127