miRBase entry: hsa-mir-548x-2

Stem-loop hsa-mir-548x-2


Accession
MI0016833
Symbol
HGNC: MIR548X2
Description
Homo sapiens hsa-mir-548x-2 precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
41 open access papers mention hsa-mir-548x-2
(141 sentences)

Sequence

486 reads, 27 reads per million, 32 experiments
augccaaauauuagguuggcacaaaaguaauuguggcuuuugccauuaaaaguaauggUAAAAACUGCAAUUACUUUCgugccaaccuaauauuugugug
..((((((((((((((((((((.(((((((((((((.(((((((((((....))))))))))).))))))))))))).)))))))))))))))))).)).

Structure
au  -                  a             c           a 
  gc caaauauuagguuggcac aaaguaauugugg uuuugccauua a
  || |||||||||||||||||| ||||||||||||| |||||||||||  
  ug guuuauaauccaaccgug UUUCAUUAACGUC AAAAUgguaau a
-g  u                  C             A           g 


Annotation confidence Not enough data
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Genome context
chr13: 65966330-65966429 [-]

Database links

Mature hsa-miR-548x-3p

Accession MIMAT0015081
Description Homo sapiens hsa-miR-548x-3p mature miRNA
Sequence 59 - UAAAAACUGCAAUUACUUUC - 78
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20733160
    Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
    "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
    "Blood (2010) 116:e118-e127