miRBase entry: hsa-mir-548ak

Stem-loop hsa-mir-548ak


Accession
MI0016840
Symbol
HGNC: MIR548AK
Description
Homo sapiens hsa-mir-548ak precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
56 open access papers mention hsa-mir-548ak
(170 sentences)

Sequence

2424 reads, 52 reads per million, 71 experiments
gugcAAAAGUAACUGCGGUUUUUGAgaaguaauugaaaaccgcaauuacuuuugcag
.(((((((((((.((((((((((((.......)))))))))))).))))))))))).

Structure
g           C            ga 
 ugcAAAAGUAA UGCGGUUUUUGA  a
 ||||||||||| ||||||||||||  g
 acguuuucauu acgccaaaaguu  u
g           a            aa 


Annotation confidence Not enough data
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Genome context
chr10: 12130760-12130816 [-]

Database links

Mature hsa-miR-548ak

Accession MIMAT0019013
Description Homo sapiens hsa-miR-548ak mature miRNA
Sequence 5 - AAAAGUAACUGCGGUUUUUGA - 25
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20733160
    Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
    "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
    "Blood (2010) 116:e118-e127