miRBase entry: hsa-mir-548am

Stem-loop hsa-mir-548am


Accession
MI0016904
Symbol
HGNC: MIR548AM
Description
Homo sapiens hsa-mir-548am precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
56 open access papers mention hsa-mir-548am
(170 sentences)

Sequence

2422 reads, 141 reads per million, 83 experiments
aguuggugcAAAAGUAAUUGCGGUUUUUGCCgucgaaaauaauggCAAAAACUGCAGUUACUUUUGUaccaaug
.((((((((((((((((((((((((((((((((........)))))))))))))))))))))))))))))))).

Structure
a                                cga 
 guuggugcAAAAGUAAUUGCGGUUUUUGCCgu   a
 ||||||||||||||||||||||||||||||||    
 uaaccaUGUUUUCAUUGACGUCAAAAACggua   a
g                                aua 


Annotation confidence High
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Genome context
chrX: 16627012-16627085 [-]

Disease association
hsa-mir-548am is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-548am-3p

Accession MIMAT0019076
Description Homo sapiens hsa-miR-548am-3p mature miRNA
Sequence 46 - CAAAAACUGCAGUUACUUUUGU - 67
Evidence experimental
Illumina [1]

Mature hsa-miR-548am-5p

Accession MIMAT0022740
Description Homo sapiens hsa-miR-548am-5p mature miRNA
Sequence 10 - AAAAGUAAUUGCGGUUUUUGCC - 31
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 20733160
    Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
    "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
    "Blood (2010) 116:e118-e127