miRBase entry: hsa-mir-548an

Stem-loop hsa-mir-548an


Accession
MI0016907
Symbol
HGNC: MIR548AN
Description
Homo sapiens hsa-mir-548an precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
56 open access papers mention hsa-mir-548an
(170 sentences)

Sequence

863 reads, 55 reads per million, 37 experiments
cauuagguuggugcAAAAGGCAUUGUGGUUUUUGccuauaaaaguaauggcaaaaaccgcaauuccuuuugcaccaaccuaau
.(((((((((((((((((((.(((((((((((((((............))))))))))))))).)))))))))))))))))))

Structure
c                   C               uauaa 
 auuagguuggugcAAAAGG AUUGUGGUUUUUGcc     a
 ||||||||||||||||||| |||||||||||||||      
 uaauccaaccacguuuucc uaacgccaaaaacgg     a
-                   u               uaaug 


Annotation confidence Not enough data
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Genome context
chrX: 106639814-106639896 [+]

Database links

Mature hsa-miR-548an

Accession MIMAT0019079
Description Homo sapiens hsa-miR-548an mature miRNA
Sequence 15 - AAAAGGCAUUGUGGUUUUUG - 34
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20733160
    Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
    "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
    "Blood (2010) 116:e118-e127