Stem-loop gma-MIR156i

Accession

MI0017820

Description

Glycine max gma-MIR156i precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

40 open access papers mention gma-MIR156i
(162 sentences)

Sequence

uuaagguugUUGACAGAAGAUAGAGAGCACagaugaugauaugcauauuauauaaaaagcagcuagggaacucaugaauugugcaucucacuccuuugugcucucuauacuucugucaucacccuucagc
..((((.((.(((((((((((((((((((((((.(((((.(((((((................................))))))).))).)).)))))))))))))).))))))))).)).))))....

Structure

--uu    u  U         -              u  -   u       uuauauaaaaagcag 
    aagg ug UGACAGAAG AUAGAGAGCACaga ga uga augcaua               c
    |||| || ||||||||| |||||||||||||| || ||| |||||||                
    uucc ac acugucuuc uaucucucguguuu cu acu uacgugu               u
cgac    c  u         a              c  c   c       uaaguacucaaggga 

Annotation confidence Not enough data

Genome context

chr5: 41728607-41728736 [+]

Mature gma-miR156i

• Accession: MIMAT0020969
• Description: Glycine max gma-miR156i mature miRNA
• Sequence: 10 - UUGACAGAAGAUAGAGAGCAC - 30
• Evidence: experimental ; 454 [1], SOLiD [2], Illumina [3]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307


2. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506


3. PubMed ID: 21751852
   Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome
   "Radwan O, Liu Y, Clough SJ"
   "Mol Plant Microbe Interact (2011) 24:958-972