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Identification of novel soybean microRNAs involved in abiotic and biotic stresses |
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|---|---|
| PubMed ID | 21663675 |
| Authors | Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R |
| Journal | BMC Genomics |
| Volume | 12 |
| Pages | 307 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| gma-MIR159a | MI0001773 | None | chr9 | 40266722 | 40266935 | + | - |
| gma-MIR166a | MI0001775 | None | chr16 | 1934911 | 1935056 | - | - |
| gma-MIR172b | MI0001781 | None | chr13 | 41847312 | 41847464 | - | - |
| gma-MIR396a | MI0001785 | None | chr13 | 27525230 | 27525369 | - | - |
| gma-MIR396b | MI0001786 | None | chr13 | 27517027 | 27517152 | + | - |
| gma-MIR319c | MI0001789 | None | chr14 | 45231920 | 45232140 | - | - |
| gma-MIR159b | MI0007206 | None | chr7 | 5424789 | 5424974 | - | - |
| gma-MIR1510b | MI0010575 | None | chr2 | 6675723 | 6675816 | + | - |
| gma-MIR2109 | MI0010579 | None | chr4 | 36995886 | 36995956 | - | - |
| gma-MIR391 | MI0016521 | None | chr13 | 42292832 | 42292941 | + | - |
| gma-MIR482b | MI0016527 | None | chr20 | 36454144 | 36454212 | + | - |
| gma-MIR4397 | MI0016553 | None | chr4 | 38550859 | 38551015 | - | - |
| gma-MIR4412 | MI0016578 | None | chr4 | 37037465 | 37037552 | - | - |
| gma-MIR4415a | MI0016584 | None | chr18 | 56193529 | 56193704 | + | - |
| gma-MIR156i | MI0017820 | None | chr5 | 41728607 | 41728736 | + | - |
| gma-MIR162b | MI0017825 | None | chr5 | 1431946 | 1432055 | + | - |
| gma-MIR166d | MI0017830 | None | chr20 | 44227240 | 44227349 | - | - |
| gma-MIR166h | MI0017834 | None | chr8 | 14920990 | 14921179 | + | - |
| gma-MIR168b | MI0017835 | None | chr1 | 48944581 | 48944690 | - | - |
| gma-MIR169f | MI0017836 | None | chr10 | 40892477 | 40892646 | - | - |
| gma-MIR169g | MI0017837 | None | chr17 | 4591798 | 4591927 | - | - |
| gma-MIR319e | MI0017843 | None | chr14 | 47276795 | 47276984 | + | - |
| gma-MIR2118a | MI0017849 | None | chr20 | 36443544 | 36443713 | + | - |
| gma-MIR2118b | MI0017850 | None | chr10 | 49169712 | 49169821 | - | - |
| gma-MIR482c | MI0017851 | None | chr18 | 57154765 | 57154854 | - | - |
| gma-MIR862a | MI0017853 | None | chr18 | 57326469 | 57326558 | - | - |
| gma-MIR1507c | MI0017854 | None | chr9 | 17134380 | 17134469 | - | - |
| gma-MIR1513b | MI0017856 | None | chr20 | 223665 | 223734 | - | - |
| gma-MIR4998 | MI0017864 | None | None | None | - | ||
| gma-MIR171i | MI0017907 | None | chr6 | 49520830 | 49520980 | - | - |
| gma-MIR5038a | MI0017913 | None | chr9 | 30857860 | 30858010 | + | - |
| gma-MIR396f | MI0017919 | None | chr15 | 556336 | 556486 | - | - |
| gma-MIR396g | MI0017921 | None | None | None | - | ||
| gma-MIR5044 | MI0017925 | None | chr18 | 57357782 | 57357932 | - | - |
| gma-MIR5368 | MI0018621 | None | chr4 | 23728083 | 23728251 | + | - |
| gma-MIR5369 | MI0018622 | None | chr11 | 16004196 | 16004310 | - | - |
| gma-MIR862b | MI0018623 | None | chr8 | 47704165 | 47704250 | + | - |
| gma-MIR5037b | MI0018624 | None | chr18 | 57328532 | 57328634 | + | - |
| gma-MIR5037c | MI0018625 | None | chr8 | 47698518 | 47698613 | + | - |
| gma-MIR5370 | MI0018626 | None | chr14 | 6870104 | 6870256 | + | - |
| gma-MIR5371 | MI0018627 | None | chr15 | 34072242 | 34072464 | + | - |
| gma-MIR5372 | MI0018628 | None | chr16 | 5771324 | 5771388 | - | - |
| gma-MIR5373 | MI0018629 | None | chr16 | 28005409 | 28005463 | + | - |
| gma-MIR5038b | MI0018630 | None | None | None | - | ||
| gma-MIR403a | MI0018631 | None | chr2 | 1041992 | 1042080 | + | - |
| gma-MIR403b | MI0018632 | None | chr10 | 1080943 | 1081042 | + | - |
| gma-MIR5374 | MI0018633 | None | chr5 | 12748029 | 12748248 | - | - |
| gma-MIR5375 | MI0018634 | None | chr16 | 2942348 | 2942538 | + | - |
| gma-MIR5376 | MI0018635 | None | None | None | - | ||
| gma-MIR5377 | MI0018636 | None | chr2 | 36745810 | 36745931 | + | - |
| gma-MIR5378 | MI0018637 | None | None | None | - | ||
| gma-MIR5379 | MI0018638 | None | None | None | - | ||
| gma-MIR5380a | MI0018639 | None | chr11 | 7797520 | 7797656 | + | - |
| gma-MIR5380b | MI0018640 | None | chr11 | 7831232 | 7831368 | - | - |
| gma-MIR171j | MI0018641 | None | chr2 | 4065759 | 4065911 | - | - |
| gma-MIR395a | MI0018642 | None | chr1 | 4840520 | 4840629 | + | - |
| gma-MIR395b | MI0018643 | None | chr2 | 1747330 | 1747424 | - | - |
| gma-MIR395c | MI0018644 | None | chr8 | 41475132 | 41475218 | + | - |
| gma-MIR397a | MI0018645 | None | chr8 | 4644313 | 4644420 | - | - |
| gma-MIR397b | MI0018646 | None | chr13 | 35595158 | 35595279 | - | - |
| gma-MIR408a | MI0018647 | None | chr2 | 837414 | 837546 | + | - |
| gma-MIR408b | MI0018648 | None | chr3 | 42619826 | 42619957 | - | - |
| gma-MIR408c | MI0018649 | None | chr10 | 37083961 | 37084086 | - | - |
| gma-MIR3522 | MI0018650 | None | chr15 | 4337688 | 4337774 | + | - |
| gma-MIR156j | MI0018651 | None | chr2 | 7901956 | 7902058 | + | - |
| gma-MIR156k | MI0018652 | None | chr6 | 4705086 | 4705177 | - | - |
| gma-MIR156l | MI0018653 | None | chr7 | 9384146 | 9384266 | + | - |
| gma-MIR156m | MI0018654 | None | chr9 | 40437756 | 40437870 | - | - |
| gma-MIR156n | MI0018655 | None | chr14 | 10456738 | 10456826 | - | - |
| gma-MIR156o | MI0018656 | None | chr17 | 37469976 | 37470065 | + | - |
| gma-MIR159e | MI0018657 | None | chr7 | 9561934 | 9562144 | - | - |
| gma-MIR159f | MI0018658 | None | chr16 | 2819636 | 2819815 | - | - |
| gma-MIR162c | MI0018659 | None | chr17 | 9894786 | 9894904 | + | - |
| gma-MIR166i | MI0018660 | None | chr2 | 14544488 | 14544584 | + | - |
| gma-MIR166j | MI0018661 | None | chr15 | 3706979 | 3707146 | - | - |
| gma-MIR169j | MI0018662 | None | chr2 | 43801693 | 43801777 | - | - |
| gma-MIR169k | MI0018663 | None | chr9 | 5312564 | 5312668 | + | - |
| gma-MIR169l | MI0018664 | None | chr14 | 5435482 | 5435595 | + | - |
| gma-MIR169m | MI0018665 | None | chr13 | 21492366 | 21492488 | + | - |
| gma-MIR169n | MI0018666 | None | chr15 | 14166062 | 14166176 | + | - |
| gma-MIR171k | MI0018667 | None | chr13 | 27458231 | 27458328 | + | - |
| gma-MIR172g | MI0018668 | None | chr10 | 31996846 | 31996959 | - | - |
| gma-MIR172h | MI0018669 | None | chr10 | 44054389 | 44054479 | + | - |
| gma-MIR172i | MI0018670 | None | chr15 | 2892841 | 2893001 | - | - |
| gma-MIR172j | MI0018671 | None | chr20 | 42009499 | 42009588 | - | - |
| gma-MIR319g | MI0018672 | None | chr2 | 40809293 | 40809490 | + | - |
| gma-MIR319h | MI0018673 | None | chr2 | 42629369 | 42629554 | + | - |
| gma-MIR319i | MI0018674 | None | chr4 | 49476554 | 49476747 | + | - |
| gma-MIR319j | MI0018675 | None | chr11 | 1382971 | 1383149 | + | - |
| gma-MIR319k | MI0018676 | None | chr11 | 28073920 | 28074105 | + | - |
| gma-MIR319l | MI0018677 | None | chr17 | 9165413 | 9165514 | - | - |
| gma-MIR319m | MI0018678 | None | chr18 | 4298047 | 4298236 | - | - |
| gma-MIR396h | MI0018679 | None | chr14 | 13772743 | 13772890 | + | - |
| gma-MIR396i | MI0018680 | None | chr17 | 8774041 | 8774175 | + | - |
| gma-MIR482d | MI0018681 | None | chr10 | 49165318 | 49165412 | - | - |
| gma-MIR1512b | MI0018682 | None | chr2 | 8707970 | 8708058 | - | - |
| gma-MIR1513c | MI0018683 | None | chr17 | 1395193 | 1395283 | - | - |
| gma-MIR4413b | MI0018684 | None | chr13 | 16661157 | 16661224 | - | - |
| gma-MIR4415b | MI0018685 | None | chr8 | 23061554 | 23061709 | + | - |
| gma-MIR167j | MI0018686 | None | chr20 | 45890458 | 45890535 | + | - |
| gma-MIR171l | MI0018687 | None | chr17 | 8830894 | 8830991 | - | - |
| gma-MIR156d | MI0001770 | None | chr8 | 3896578 | 3896728 | + | - |
| gma-MIR156e | MI0001771 | None | chr18 | 57144436 | 57144559 | - | - |
| gma-MIR156c | MI0001772 | None | chr16 | 5359989 | 5360173 | - | - |
| gma-MIR166b | MI0001776 | None | chr8 | 282785 | 282951 | - | - |
| gma-MIR172a | MI0001780 | None | chr12 | 6139598 | 6139756 | - | - |
| gma-MIR319a | MI0001782 | None | chr5 | 39506583 | 39506789 | - | - |
| gma-MIR319b | MI0001783 | None | chr8 | 1650575 | 1650782 | - | - |
| gma-MIR156a | MI0001784 | None | chr17 | 5885507 | 5885628 | - | - |
| gma-MIR156b | MI0001790 | None | chr14 | 992155 | 992274 | + | - |
| gma-MIR169a | MI0001791 | None | chr9 | 38336014 | 38336134 | + | - |
| gma-MIR159c | MI0007207 | None | chr16 | 2830034 | 2830218 | - | - |
| gma-MIR169b | MI0007211 | None | chr2 | 10504688 | 10504870 | + | - |
| gma-MIR169c | MI0007212 | None | chr9 | 5343659 | 5343773 | + | - |
| gma-MIR482a | MI0007218 | None | chr2 | 7873063 | 7873157 | + | - |
| gma-MIR1507a | MI0007219 | None | chr13 | 27036567 | 27036673 | + | - |
| gma-MIR1510a | MI0007222 | None | chr16 | 31887382 | 31887474 | + | - |
| gma-MIR1513a | MI0007225 | None | chr7 | 43192197 | 43192289 | + | - |
| gma-MIR1520d | MI0007233 | None | chr7 | 124349 | 124459 | - | - |
| gma-MIR396c | MI0010572 | None | chr13 | 45239131 | 45239247 | + | - |
| gma-MIR1507b | MI0010573 | None | chr17 | 5926147 | 5926244 | + | - |
| gma-MIR172c | MI0010727 | None | chr18 | 2979182 | 2979334 | + | - |
| gma-MIR172d | MI0010728 | None | chr14 | 5659819 | 5659968 | + | - |
| gma-MIR172e | MI0010729 | None | chr11 | 31482550 | 31482702 | - | - |
| gma-MIR396d | MI0016503 | None | chr17 | 8782240 | 8782347 | - | - |
| gma-MIR156f | MI0016559 | None | chr2 | 47699715 | 47699820 | - | - |
| gma-MIR169d | MI0016571 | None | chr15 | 14186946 | 14187033 | + | - |
| gma-MIR172f | MI0016574 | None | chr11 | 26905395 | 26905527 | + | - |
| gma-MIR169e | MI0016576 | None | chr15 | 14210033 | 14210152 | + | - |
| gma-MIR156g | MI0016580 | None | chr19 | 8868796 | 8868913 | - | - |
| gma-MIR159d | MI0016581 | None | None | None | - | ||
| gma-MIR396e | MI0016586 | None | chr17 | 35037484 | 35037597 | - | - |
| gma-MIR156h | MI0017819 | None | chr4 | 5047205 | 5047294 | - | - |
| gma-MIR166c | MI0017829 | None | chr7 | 4502830 | 4502959 | - | - |
| gma-MIR166e | MI0017831 | None | chr4 | 47978621 | 47978730 | + | - |
| gma-MIR166f | MI0017832 | None | chr10 | 41798829 | 41798938 | + | - |
| gma-MIR166g | MI0017833 | None | chr10 | 2913323 | 2913432 | - | - |
| gma-MIR319d | MI0017842 | None | chr15 | 40974346 | 40974535 | - | - |
| gma-MIR319f | MI0017844 | None | chr10 | 48913063 | 48913157 | - | - |
| gma-MIR408d | MI0017848 | None | chr19 | 47281670 | 47281799 | - | - |
| gma-MIR169h | MI0017912 | None | chr9 | 5330689 | 5330839 | + | - |
| gma-MIR169i | MI0017918 | None | chr13 | 21505359 | 21505509 | + | - |
| gma-MIR156p | MI0019741 | None | chr11 | 462200 | 462299 | - | - |
| gma-MIR172k | MI0019746 | None | chr12 | 33517484 | 33517617 | + | - |
| gma-MIR156q | MI0019748 | None | chr13 | 22074983 | 22075087 | + | - |
| gma-MIR172l | MI0019750 | None | chr13 | 43075243 | 43075420 | + | - |
| gma-MIR169o | MI0019751 | None | chr13 | 21496986 | 21497084 | + | - |
| gma-MIR319n | MI0019752 | None | chr13 | 28262485 | 28262580 | - | - |
| gma-MIR169p | MI0019756 | None | chr15 | 14192081 | 14192178 | + | - |
| gma-MIR156r | MI0019757 | None | chr16 | 6633951 | 6634116 | + | - |
| gma-MIR396j | MI0019759 | None | chr16 | 31530670 | 31530803 | - | - |
| gma-MIR156s | MI0019761 | None | chr17 | 4021217 | 4021350 | - | - |
| gma-MIR169r | MI0019762 | None | chr17 | 4587059 | 4587161 | - | - |
| gma-MIR169s | MI0019763 | None | chr17 | 4594138 | 4594257 | - | - |
| gma-MIR396k | MI0019764 | None | None | None | - | ||
| gma-MIR166k | MI0019768 | None | chr19 | 36827774 | 36827945 | - | - |
| gma-MIR156t | MI0019770 | None | chr1 | 56198440 | 56198539 | + | - |
| gma-MIR482e | MI0019772 | None | None | None | - | ||
| gma-MIR169t | MI0019778 | None | chr5 | 38544108 | 38544233 | + | - |
| gma-MIR166l | MI0019780 | None | chr6 | 45680685 | 45680863 | - | - |
| gma-MIR395d | MI0019788 | None | chr8 | 41415505 | 41415625 | - | - |
| gma-MIR395e | MI0019789 | None | chr8 | 41424558 | 41424674 | - | - |
| gma-MIR395f | MI0019790 | None | chr8 | 41439069 | 41439190 | - | - |
| gma-MIR395g | MI0019791 | None | chr8 | 41445444 | 41445571 | - | - |
| gma-MIR166m | MI0019792 | None | chr9 | 36469526 | 36469701 | + | - |
| gma-MIR169u | MI0019794 | None | chr9 | 45847295 | 45847435 | - | - |
| gma-MIR156u | MI0021674 | None | chr2 | 38792955 | 38793054 | + | - |
| gma-MIR156v | MI0021675 | None | chr4 | 4306348 | 4306451 | + | - |
| gma-MIR156w | MI0021676 | None | chr6 | 4047089 | 4047194 | + | - |
| gma-MIR156x | MI0021677 | None | chr14 | 9223981 | 9224092 | + | - |
| gma-MIR156y | MI0021678 | None | chr17 | 38139717 | 38139822 | - | - |
| gma-MIR156z | MI0021679 | None | chr7 | 5432656 | 5432842 | - | - |
| gma-MIR156aa | MI0021680 | None | chr16 | 2833375 | 2833561 | - | - |
| gma-MIR156ab | MI0021681 | None | chr7 | 5415191 | 5415378 | + | - |
| gma-MIR166n | MI0021690 | None | chr5 | 38037266 | 38037408 | - | - |
| gma-MIR166o | MI0021691 | None | chr6 | 13019417 | 13019561 | - | - |
| gma-MIR166p | MI0021692 | None | chr3 | 37501582 | 37501703 | - | - |
| gma-MIR166q | MI0021693 | None | chr4 | 47978878 | 47979029 | + | - |
| gma-MIR166r | MI0021694 | None | KQ474607.1 | 1988 | 2142 | - | - |
| gma-MIR166s | MI0021695 | None | chr7 | 10246809 | 10246932 | + | - |
| gma-MIR166t | MI0021696 | None | chr9 | 39698809 | 39698944 | - | - |
| gma-MIR166u | MI0021697 | None | chr4 | 33862799 | 33862939 | + | - |
| gma-MIR169v | MI0021699 | None | chr13 | 15982021 | 15982322 | - | - |
| gma-MIR395h | MI0021714 | None | chr1 | 4814429 | 4814541 | - | - |
| gma-MIR395i | MI0021715 | None | chr1 | 4819957 | 4820072 | - | - |
| gma-MIR395j | MI0021716 | None | chr1 | 4832871 | 4832996 | - | - |
| gma-MIR395k | MI0021717 | None | chr1 | 4835314 | 4835439 | - | - |
| gma-MIR395l | MI0021718 | None | chr2 | 1760207 | 1760340 | + | - |
| gma-MIR395m | MI0021719 | None | chr2 | 1774462 | 1774561 | + | - |
| gma-MIR319o | MI0031039 | None | chr6 | 11459824 | 11460018 | - | - |
| gma-MIR319p | MI0031041 | None | chr6 | 22789766 | 22789844 | + | - |
| gma-MIR319q | MI0031060 | None | None | None | - | ||
| gma-MIR169w | MI0033468 | None | chr9 | 5348169 | 5348283 | + | - |